Downloads
Last updated
Last updated
pATLAS database requests can be done through URLs, similar to what is done in .
If you have a list of accession numbers present in pATLAS database, you can download all metadata through:
or
It will fetch an array of json objects in which each contains all metadata available for that accession number.
E.g.:
Send the post to http://www.patlas.site/results/
.
Send a json
with the request. This json
must contain a list of
accession numbers
The sequences of plasmids from pATLAS database can be downloaded through the following API when providing a list of the accession numbers:
It will generate a fasta file with the accession numbers requested and the sequences associated with each accession number.
Limitation: This type of request to pATLAS database cannot have thousands of accessions therefore for requests with thousands of accessions, use the following request type:
Python:
Javascript / JQuery:
Note - The download
button in the top bar downloads the accession numbers associated with the current selection using this last API, so it is possible to download the full pATLAS data set. See for more information. also uses this API.